Can the Neuron Fire Again After Firing
Neuron Fire
Two neurons fire when a specific shape (either a triangle or a foursquare) is presented and the other two burn down depending on the shape'south position (pinnacle or lesser of a rectangular frame).
From: Philosophy of Linguistics , 2012
Reduced Single Neuron Models
FABRIZIO GABBIANI , STEVEN J. COX , in Mathematics for Neuroscientists, 2010
10.five EXERCISES
- 1.
-
Simulate an LIF neuron receiving random excitatory current-type synaptic inputs with parameters τ = xx ms, R = xMΩ, v thres = ten mV, t ref = 0, and v reset = 0. Simulate the model over 1s, with a time step of 0.05 ms and assume that it receives n ex = 500 excitatory inputs whose activation times are uniformly distributed over that interval, each with an associated accuse q ex = 2 pCb. Use the marching scheme of Eq. (x.4) to reproduce Figure 10.2A.
- two.
-
Modify the model of the previous exercise to include electric current-blazon inhibition. Use the same model parameters, but assume that q in = 4 pCb and that the number of excitatory and inhibitory inputs over the i s interval is north ex = 660 and due north in = 100, respectively (Figure 10.2B).
- iii.
-
Replace the current-type synapse of Practice one by an α-synapse. Presume τα = ane ms and a reversal potential v ex = seventy mV in a higher place remainder. Utilize a peak conductance thousand max = K qex , where K is such that the total charge transferred by the synapse equals q ex when the potential is clamped at its resting value. Use north ex = 600 (Effigy 10.2C).
- 4.
-
Add together inhibitory α-synapses. Employ the same factor K every bit in the previous practise and q in = 4 pCb as in Exercise 2. Assume five in = 0 mV, n ex = 690, and n in = 100 (Figure 10.2D).
- 5.
-
Simulate the response of a LIF neuron with threshold fatigue to a 250 ms long, two nA current pulse. Assume C = 2nF, τ = twenty ms, v thres0 = viii mV, δv thres = 4 mV, = lxxx ms (Figure ten.3, top). Hint: Utilize a elementary forward Euler integration scheme with dt = 0.one ms.
- 6.
-
Plot the steady-land activation and inactivation variables for I T , given past due south ∞(V) = 1/(1 + exp(−(V + 65)/7.8)) and h ∞(V) = 1/(ane + exp ((V − θ h /one thousand h )), with θ h = −81 mV and chiliad h = six.25 mV−1. Plot the constructive inactivation time constant, τ h /ϕ h with τ h (V = h ∞ (V) exp((V + 162.3)/17.8) + xx.0, and ϕ h = 2.
- 7.
-
Implement the model of Eq. (ten.7) using a hybrid Euler scheme. Compute the response to xc ms long −1 μA/cm2 and +3 μA/cm2 current pulses, respectively (Figure x.nine). In Eq. (x.seven), C m = 1μF/cmii and all variables are normalized per unit area (eastward.grand., in the example of I inj , μA/cmtwo).
The T-type calcium current is described by , where the activation s is assumed to be instantaneously at equilibrium. The inactivation h and the other activation and inactivation variables described below are governed by the differential equation
(x.ten)
with Ten = h, q, n. ϕTen is a temperature scaling factor that determines the effective time constant, τ X /ϕ X , of X. Assume = 0.3 mS/cmii, V Ca = 120 mV and see Practise 6 for other values.The h-current is described by with = 0.04 mS/cmtwo and V h = −forty mV. The steady-country activation and time constant functionals are specified in Eq. (five.33). Nosotros presume ϕ h = 1.
The potassium current is given by , with
with ϕ n = 200/7, 30 mS/cm2, V G = −80 mV, and σ M = 10 mV.The sodium current is given past . The activation is assumed to be instantaneous and is replaced past its steady-state value. The inactivation h has been replaced by (0.85− northward) every bit per Exercise four.6. The constituents of 1000 ∞ are
(x.11)
with , Five Na = 55 mV, and σ Na = 3 mV.The persistent sodium current is given by with = 9 mS/cm2 and σ Na = −v mV in Eq. (10.eleven).
The leak electric current is given by I L = thou L (V − V 50 ) with m Fifty = 0.one mS/cm2.
- 8.
-
Implement the CA3 model of Eq. (ten.8) using the Matlab function ODE23 based on a Runge–Kutta integration scheme. The various currents of the model are defined as follows:
and 2 calcium-dependent potassium currentsThe activation and inactivation variables obey
with w = h, n, s, r, and q, respectively. The functions α w and β west are
and
with α q = min(0.00002c,0.01), and β q = 0.001 and maximal conductances (in mS/cm2)
and reversal potentials (in mV),The coupling parameters are p = 0.5, and g c = 2.1 mS/cmii. The capacitance is C k = iii μF/cm2 and χ(c) = min(c/250, i). The stable rest state of the model is at the country-variable values of (5 s , 5d,h,n,s,r,q,c) = (−four.6, −4.5,0.999,0.001,0.009,0.007,0.01,0.2), with the membrane potentials V s and V d relative to −60 mV.
Utilize the model to reproduce Figures 10.10B, 10.11, and 10.12 using the parameters given in the effigy legends.
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Methods and Models in Neurophysics
C. van Vreeswijk , H. Sompolinsky , in Les Houches, 2005
5.one. Electric current based synapses
We consider network of N IF neurons which are randomly connected. The connection strength, Jij between the i th post- and jth pre-synaptic cell is J/√K is probability 1000/Due north, and null otherwise. The state of the neuron is characterized by it voltage 5i which satisfies
(5.1)
Here CThou is the membrane capacitance, g50 the leak conductance, I 0 the external input, and Ii the inhibitory feedback electric current. The membrane time constant, τ yard ≡ CM /thouL is 10 msec. The neurons integrate their input until the voltage reaches the threshold, θ, afterwards which they are immediately reset to the potential, Vreset , which we assume to exist Fivereset = 0. For the input currents we will consider 2 models. We volition start consider a model in which they are described by currents and independent of the postal service synaptic voltage. In the second model we will accept the dependence on the post-synaptic voltage into account, and the synaptic action as changes of the conductance of a sodium or potassium channel.
In the model we consider first the external current is given past and the inhibitory feedback satisfies
(5.2)
where < . The activity of the synapses projecting from neuron j are modeled as the sum of the contributions of the preceding pre-synaptic spikes
(5.three)
where is the time of the grandth fasten on neuron j and single spike response, ε, is described by a difference of exponents
(v.4)
for t > 0. The prefactor is called such that the integral of ε is 1, and hence the boilerplate of Ej is equal to neuron j's firing rate. Nosotros will use for the synaptic time constants τane = 3 msec, and τ2 = 1 msec. The synaptic weight J is expressed in units of time, and throughout this section we will use vii = 36 msec.
If we assume that the network connectivity is sufficiently thin, so that the inputs from the dissimilar pre-synaptic neurons can exist considered equally uncorrelated, the cell receives One thousand uncorrelated fluctuating inputs of forcefulness one/√K. The mean net input, Inet , into a cell is
(5.5)
where ν I is the average firing rate. In the big K limit the internet input will be much large than the threshold current Ic if ν I is less than τ m ν0/J. This would atomic number 82 to a raped increment of the firing charge per unit for all cells so that ν I would increase chop-chop, and the neurons' input decrease, until the action reaches the point where the divergence between the cyberspace input into the jail cell and the threshold reaches 1. For large simply finite Grand the hateful firing rate will deviate from τ thou ν0/J by an corporeality of order ane/√Yard.
These predictions were tested with simulations of networks with K = 100 and Northward = grand and K = chiliad and N = 1000. In both networks the average firing rate was determined for different external input rates ν0. The results are plotted if Fig. 13. In both the network rate ν I varies linearly with ν0. The difference from the theoretical space Thou is smaller in the large network than in the small-scale network. Indeed the difference is decreased by about a cistron of √ten equally one would expect if these deviations reflect ane/√K corrections.
Fig. xiii. Mean firing rate ν i as function of the external charge per unit ν0 in an inhibitory network in which the synapses are modeled as currents. The solid line shows the theoretical prediction in the space Chiliad limit. Pluses testify results from simulations of a network with One thousand = 100 and N = 1000, diamonds for a network with K = m and North = 10000
The temporal correlations induced in past the network are more complex than those in the binary network, due to the interplay between the temporal correlations induce by the finite synaptic time constants, and the reset of the potential. For large Chiliad the evolution of the voltage tin be approximated by
(5.half dozen)
where the zi due south are (for sparsely coupled networks) contained, temporally correlated Gaussians. The temporal correlations in the input both determine the temporal correlations in the fasten statistics and are determined by it. They accept to satisfy complicated self-consistency equations. Qualitatively the film is as follows: Immediately after a spike, the cells voltage is reset to 0 and it takes a time of order τ m before the cell can fire over again. This leads to negative correlation in the cell'southward spike correlation up to a time of society τ m . For the fluctuation in the input these spike correlations are filtered through the synaptic response ε, so that the zi S have a positive correlation up to time of order τ1 and so negative upward to a time of order τ m , after which the correlation is close to zero.
Figure fourteen shows the inter-spike interval distribution for a neuron in a network with K = 1000, North = 10000 and ν0 = 40 Hz. Up to a time of social club τ one thousand (10 msec) there are no intervals, then the fasten probability increases chop-chop, after which the probability decays exponentially, as would expects if there are no long range correlations in the input.
Fig. 14. Inter-spike interval histogram for a neuron in the network with Grand = grand, and North = 10000 and ν0 = 40 Hz.
In networks of finite size, at that place is a finite probability that neurons have common inputs. If K/Northward is small-scale, the average number of mutual inputs for two cells is Yard 2/N. These volition lead to small correlations in their input that are of gild J 2 Yard/N. Figure 15 prove the correlation of the network activity in a network with One thousand = 100 and ν0 = twoscore Hz, both for N = thousand (solid line) and N = 5000 (dashed line). The number of times that ii spikes with a filibuster between t and t + δt divided past is plotted against t. Here T is the time of the simulation over which was measured. If there are no correlation the expected value of this quantity is i. For a network with North = 1000 in that location are positive equal fourth dimension correlations, followed past a negative correlation for about 40 msec, another small bump of positive correlations, after which the correlation accept died out. On sees the same for North = 5000, except that the correlations are much smaller.
Fig. 15. Network correlations for networks with K = 100 and ν0 = 40 Hz. The solid line shows the result for N = yard, the dashed line for North = 5000.
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Methods and Models in Neurophysics
H. Sompolinsky , O.L. White , in Les Houches, 2005
The Integrate and Burn Neuron
The equation for the f-I bend of the Integrate and Fire neuron is
(two.23)
where IC is the threshold electric current and τ the characteristic time scale. This function is plotted in Figure 2.iv.
Fig. 2.4. Integrate and fire neuron f-I curve.
Low frequencies: The frequency of firing starts from nada continuously just the ascent is very steep, with a slope which diverges at the threshold.
High frequencies: This f-I bend is linear at loftier frequencies. For I/IC ≫ one one tin can Taylor expand the log term using for x ≪ 1 to derive the event
(2.24)
The slope of the f-I curve for big I/IC is thus , which ways that in the high frequency limit the leak current is negligible compared to the capacitance current.
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Neuronal models of ensemble dynamics
L. Harrison , ... K. Friston , in Statistical Parametric Mapping, 2007
Overview
In the first section, nosotros review the theory of integrate-and-fire neurons with synaptic dynamics and its conception equally an FPE of interacting populations mediated through mean-field quantities (meet Risken, 1996; Dayan and Abbott, 2001 for further details). The model encompasses four basic characteristics of neuronal activity and organization – neurons are: dynamic, driven past stochastic forces, organized into populations with similar biophysical properties, and have multiple populations that interact to class functional networks. In the 2d section, we discuss features of the model and demonstrate its face-validity using simulated information. This involves inverting a population density model to estimate model parameters given synthetic data. The give-and-take focuses on outstanding issues with this approach in the context of generative models for LFP/ERP data.
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Methods and Models in Neurophysics
Thousand. Mato , in Les Houches, 2005
3.ii. Stability of the asynchronous state
The stability of the asynchronous state in a homogeneous network of leaky integrate-and-fire neurons has been studied in [25]. We present here the generalization of their approach to the instance of heterogeneous network of QIF neurons [24]. In this approach we ascertain a change of variable from V iα to y iα given past
(3.8)
where ν i and να are the firing rates of neuron i and the average population firing rate in the asynchronous land, respectively and thou αβ are the strengths of the synapses from population β to population α. This new variable evolves according to
(3.9)
where
(3.10)
is the deviation of the firing rate of neuron j at time t from its value in the asynchronous land, and
(3.11)
The probability density, satisfies the continuity equation:
(3.12)
where the flux is
(3.13)
In the asynchronous land: . We analyze the temporal beliefs of the deviations from the asynchronous state, . These deviations satisfy:
(three.xiv)
For synaptic interactions modeled with a difference of exponentials given by Eq. 2.45 it is straightforward to show that ∈α(t) evolves according to:
(iii.15)
(3.xvi)
where for m = ane, 2. The perturbation jα has to be evaluated at y = 1 because according to Eq. three.viii this corresponds to the crossing of the threshold.
The asynchronous state is stable if small perturbations somewhen decay. Assuming that are proportional to exp(λt), and integrating Eq. 3.14 one finds after a straightforward but deadening calculation that the perturbation rate λ satisfies:
(3.17)
where
(3.xviii)
and
(iii.19)
with
(three.20)
(3.21)
The spectral equation, Eq. 3.17, determines the eigenvalues of the dynamical equations linearized effectually the asynchronous country. Note that this spectral equation also holds if a fraction of the neurons are below threshold and do not burn down in the asynchronous land. Indeed an infinitesimal perturbation cannot make these neurons fire. Therefore they do not contribute to the destabilization of the asynchronous state.
The asynchronous state is stable if all the eigenvalues, the solutions to Eq. iii.17, have a negative real part. Therefore, continuous onset of instabilities occurs when at least one of the eigenvalues crosses the imaginary axis when some parameter is changed. At this onset, λ = iμ. The onset of instabilities of the asynchronous state are adamant by taking the real and imaginary part of Eq. iii.17. The simultaneous solution of these equations decide μ and the coupling at the onset of instabilities equally a office of the other parameters of the model.
At instability onset the synaptic currents in the unstable mode oscillate with a frequency given by the imaginary function μ of the critical eigenvalue. The dephasing δ between the oscillations of the two populations is:
(3.22)
A positive (resp. negative) value of the phase lag δ means that the oscillation of the inhibitory population is in advance (resp. delayed) over the excitatory population.
To report how the stability of the asynchronous states depends on the synaptic properties nosotros construct phase diagrams for a fixed distribution of the firing rates of the two populations, PE (ν) and PI (ν), taking as parameters the forcefulness of the four interactions. This implies that when the interaction strengths are changed, the external average inputs (or the firing thresholds) accept to be modified appropriately to keep constant the total input to the 2 populations. Because of the normalization of the synaptic interactions, irresolute the synaptic fourth dimension constants does not touch on the firing charge per unit distribution in the asynchronous state. To written report their office on the emergence of synchrony, the synaptic time constants tin be varied while maintaining constant all the other parameters.
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Noise Exploitation and Accommodation in Neuromorphic Sensors
Thamira Hindo , Shantanu Chakrabartty , in Engineered Biomimicry, 2013
2.3 Noise exploitation in neurobiology
As mentioned in Section 2.one, dissonance plays a constructive role in neurobiology. A single neuron, by its very nature, acts as a noisy and crude (less than 3 bits accurate) computational unit [xx–23]. It is non only affected by intrinsic dissonance (east.thousand., thermal noise in the ion channels) and extrinsic noise (east.m., racket due to the neurotransmitters nowadays in the synaptic junctions), but it is also affected by noise in the sensor [24–27]. For example, the photoreceptor cells in the retina generate thermal and quantum noise due to the photons impinging on the retinal membrane. Thus, the spike railroad train generated by a neuron non only exhibits a significant corporeality of jitter and drift but is also severely limited in its dynamic range and bandwidth (less than 500 Hz) due to its refractory menses. In spite of these limitations, networks of spiking neurons are remarkably authentic and are able to process large-bandwidth (much higher than 500 Hz) analog sensory signals with very high precision (greater than 120 dB) [28]. Through development, neurobiological systems have evolved to exploit noise as a computational resources rather than a hindrance. A written report reported in Ref. 29 demonstrated the increase in the reliability of neuronal firings with the improver of noise. In yet some other study [30], it was shown that racket facilitates reliable synchronization of the firing patterns in a population of neurons.
In this department, we describe ii types of noise exploitation techniques commonly observed in neurobiology: (a) stochastic resonance (SR) and (b) noise shaping. In stochastic resonance, the addition of random noise enhances the detection of a weak, periodic signal, the aamplitude of which is smaller than the firing threshold of the neuron. Noise-shaping principles apply to a population of neurons where the SNR of the network is enhanced by shifting the intrinsic noise out of the frequency bands where the signals of interest are nowadays.
two.iii.1 Stochastic Resonance
Figure 2.five shows the basic principle of point enhancement using stochastic resonance. The threshold of an integrate-and-fire neuron is denoted by V th, whereas 5(t) is the membrane potential driven by a periodic stimulus. When noise or random perturbation is absent, every bit shown in Figure two.va, the neuron does not fire because the aamplitude of the membrane potential v(t) is below the threshold Five thursday . When dissonance (extrinsic or intrinsic) is added to the organisation, equally shown in Figure ii.vb, there exists a finite probability that the membrane potential 5(t) will cross the threshold V th, which would result in the generation of spikes. The rate of spikes would therefore be proportional to the level of the racket and to the amplitude of the membrane potential or input stimulus. However, when the magnitude of the noise is significantly large, as shown in Figure 2.fivec, then the spike is generated fifty-fifty without the presence of the stimuli. Thus, the SNR of the system exhibits a resonance-like miracle for which the peak is determined by the level of additive noise and by the amplitude of the input stimuli.
Effigy 2.five. Mechanism underlying the stochastic resonance technique for detecting sinusoidal input bespeak with aamplitude lower than the spiking threshold of the neuron: (a) at low levels of random noise, (b) at optimal level of random noise, (c) at large magnitudes of random noise, and (d) signal-to-noise ratio for the output spike trains corresponding to the condition (a), (b), or (c).
Stochastic resonance has been extensively studied in literature, and numerous mathematical models exist that capture the resonance phenomenon nether diverse stimuli in the presence of dissimilar noise statistics [29, 31, 32]. The existence of SR in neurobiology was commencement reported in the mechanoreceptor hair cells of the crayfish (Procambarus clarkii). The cells were shown to use stochastic resonance to enhance the detection of minor vibrations (caused by planktons) in aquatic environments. Stochastic resonance was as well observed in mechanosensory systems of crickets, where it was used to recognize weak, low-frequency audio-visual signatures emitted by the wing beats of a predator wasp [33]. Also, it was shown that adding noise to a weak stimuli improves the timing precision in neuronal action and that the cells are able to suit their intrinsic threshold values to the overall input point ability. We defer our discussion of the part of adaptation in SR until Section 2.4.
An organism in which stochastic resonance is exploited for enhanced electrical sensing is the paddlefish (P. spathula). Its electro-sensory receptors use stochastic resonance to notice and localize depression-frequency electric fields (0.5–20 Hz) emanated by planktons (Daphnia). In this case, the source of racket is due to the prey themselves, which in turn increases the sensitivity of the paddlefish electro-sensory receptors [6].
two.3.two Racket Shaping
In Department two.2, nosotros described population rate encoding or averaging the firing activity across multiple neurons as a method for achieving higher dynamic range. Unfortunately, the simple averaging of racket across independent neurons in the network is suboptimal because the SNR improves only equally a square root of the number of neurons [30]. Information technology would therefore require an boggling number of neurons to accomplish the SNR values (greater than 120 dB) typically observed in biological systems. It has been proposed that a possible mechanism backside the remarkable processing acuity achieved by neuronal networks is noise shaping, a term that refers to the mechanism of shifting the energy contained in dissonance and interference out of the regions (spectral or spatial) where the desired information is present. It has been argued by Mar et al. [xxx] that inhibitory connections betwixt neurons could lead to noise-shaping beliefs and that the SNR improves directly as the number of neurons, a significant comeback over uncomplicated averaging techniques.
In this section, nosotros draw the dissonance-shaping machinery using the integrate-and-fire model described via Eq. (2.ii). Consider a neuronal network consisting of Due north integrate-and-fire neurons. Each neuron is characterized by its intrinsic voltage 5i (t), i ∈ [1, N ], and the neuron fires whenever vi exceeds a threshold Five th . Betwixt consecutive firings, the dynamics of the membrane potential can be expressed using the integrate-and-fire model every bit [30]
(2.five)
Here, are the set of firing times of the jthursday neuron and τk denotes the time abiding of the neuron, capturing the leaky nature of integration denoted past the leaky potential of the membrane vi (t)/τg . The exponential term and the related time constant τsouth model the presynaptic filter h(t) in Eq. (2.2) and the time abiding of the presynaptic spike train. The parameter prepare Wij denotes the synaptic weights between the ithursday and jth neurons and denotes the set of learning parameters for this integrate-and-fire neural network.
To bear witness how the synaptic weights Wij influence noise shaping, consider ii specific cases equally described in Ref. 30: (a) when Due westij = 0, implying there is no coupling between the neurons and each neuron fires independently of the other; and (b) when Wij =West, implying that the coupling between the neurons is inhibitory and constant. For a unproblematic sit-in, τm is set to ane ms and Northward is fix to 50 neurons. For the case in which the input 10i (t) is constant, the raster plots indicating the firing of the 50 neurons for the uncoupled instance and for the coupled case, as in Figures ii.half-dozena and b, respectively. The bottom trace in each panel shows the firing pattern of the neuronal population that has been obtained by combining the firings of all the neurons. For the uncoupled case, the population firing shows clustered behavior where multiple neurons fire could fire in close proximity, whereas for the coupled case, the firing rates are compatible, indicating that the inhibitory coupling reduces the correlation between the neuronal firings.
Figure 2.6. Illustration showing the dissonance-shaping principle in a population of integrate-and-fire neurons [30] and in electric fish [14, 34]: (a) spiking patterns generated when no inhibitory coupling be, (b) spiking patterns generated when inhibitory coupling exists betwixt the neurons that make the firing more uniform compared to the uncoupled case, (c) comparison in the spectral domain that clearly shows the connection between inhibitory coupling and noise shaping, and (d) noise shaping observed in electric fish. Adapted from Refs. fourteen and 34.
To sympathize the implication of the inhibitory coupling for noise shaping, a sinusoidal input at frequency f0 = 1 kHz was applied to all the neurons and the population firing rates are analyzed in frequency domain using a curt-time Fourier transform. Figure two.6c shows a comparison of the power spectrum for a single neuron, a neuron in a population of a coupled and an uncoupled network, respectively. The spectrum for a single neuron shows that information technology is unable to rails the input betoken since its bandwidth (ane kHz) is much larger than the firing rate of the neuron, whereas for the uncoupled/coupled neurons in a population instance, the input signal tin can be easily seen. For the uncoupled case, the racket floor, all the same, is flat, whereas for the coupled case, the noise floor from the signal ring is shifted in the higher-frequency range, as shown in Figure ii.sixc. The shaping of the in-band racket flooring enhances the SNR ratio of the network for a big network, and the improvement is directly proportional to the number of neurons [30].
Noise shaping has been observed in the sensory organisation of the electric fish that detects the perturbation of the ambient electric field. The intensity of the receptive field direct modulates the firing rate of the afferent neurons. The firing rates are synchronized where spikes with long interspike intervals follow spikes with short interspike intervals. This correlation between the interspike intervals leads to a noise-shaping effect, as shown in Figure 2.6d, where the racket is shifted out of the input stimuli [34].
The role of synaptic weights Wij in noise shaping is not yet understood. These network parameters have to be learned and their values are critical for the successful exploitation of racket shaping and stochastic resonance. Synaptic learning and accommodation are the topics of the next department.
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Analysis of Combinatorial Neural Codes: An Algebraic Arroyo
Carina Curto , ... Nora Youngs , in Algebraic and Combinatorial Computational Biology, 2019
7.1.2 Receptive Field Relationships
The neural code captures relationships between the firing behavior of different neurons, and thus captures ideas about the interactions between their receptive fields. For example, if there is a codeword where i, j ∈supp(c) (so c i =c j = 1), nosotros would note that at some betoken, neurons i and j are both firing. Thus their receptive fields overlap, or equivalently, is nonempty. Yet, if no such codeword appears, then we must presume that . Similarly, nosotros might assume that if nosotros notice no codewords where neuron i is firing and neuron j is not. In general, a relationship of the form
is referred to as a receptive field (RF) relationship, where we use the conventions that , the unabridged stimulus space, and .
Example 7.2
Consider the code . Since there is no codeword where all 3 neurons fire together, we annotation the RF relationship must agree in any realization of . We also annotation that there is no codeword where both neuron 1 and neuron ii fire, so the RF relationship holds. Moreover, the former RF human relationship nosotros found is a effect of the latter. Similarly, nosotros notation that neuron three fires but when neuron 2 is also firing, so in any realization of .
Exercise seven.2
Extract every bit many receptive field relationships as you can from the following code:
Are any of these RF relationships consequences of others on the list?
Chiefly, the RF relationships extracted from a code show relationships which must concord in any realization of the code ; they are features of the code, rather than of any i particular realization .
Exercise vii.3
Permit be the code from Practise vii.2. Draw two different realizations of in . Verify that the set of RF relationships you constitute in that practise concord for both realizations.
While RF relationships are associated directly with a lawmaking , there are some RF relationships which will concord for any code , as the post-obit exercise shows.
Do 7.iv
Let be an arbitrary code. Evidence that if σ and τ are subsets of [n] such that , and then whatever receptive field relationship of the form
must be true in whatsoever realization of .
We now give a preview of how RF relationships can be used to infer construction.
Example 7.3
Consider the code . We observe that in this lawmaking, neuron i never fires without one of neuron 2 or neuron 3 firing, so in any realization of , we must take . Still, we too see that neurons ii and 3 never fire at the aforementioned time, so in any realization, . Thus, U 1 is contained within two completely disjoint sets.
If we make no assumptions about the backdrop of the receptive fields U i , then we accept but made observations about the code itself which must hold in whatever realization. If, however, we make some assumptions nigh properties of the receptive fields, then we tin make up one's mind much more interesting properties of possible realizations. For example, we may notice that a realization exhibiting RF relationships is impossible.
Exercise vii.five
Show that if that our sets U i must be convex and open, then there is no realization of the code in (or, indeed, in for any d).
This exercise exhibits i case of a topological obstruction, a characteristic which indicates that this code cannot have a realization consisting of convex open up sets. Section seven.4 goes into more item about such obstructions.
For small examples, as in Exercise seven.2, we can list all the receptive field relationships by hand. Still, for larger codes, such a list will not be feasible. Nor is it articulate that a full list is necessary, since some of these relationships are redundant, or are true for every code, and thus convey no important information near the particular code in question. Thus, nosotros demand a method to efficiently extract the important RF relationships from a lawmaking.
For this, we will turn to algebraic geometry. We motivate its use by because the example of the simplicial complex, a related combinatorial/topological object which has a well-known algebraic encoding.
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Cognitive Computing: Theory and Applications
A.S. Maida , in Handbook of Statistics, 2016
5.1 Abstract Neurons
All network models discussed in this department are spiking neural networks in dissimilarity to traditional ANNs that use a sigmoidal or rectified linear output office. In abstract models, there are two common model neurons in use. The simplest is the leaky integrate-and-fire (LIF) neuron. The LIF neuron is modeled as a parallel RC circuit that charges in response to its input.
It has a voltage threshold and when this is reached, the circuit emits a spike and then resets to its resting level, which is usually zip. The LIF neuron has a time constant that is associated with its RC excursion. If the resistance in the circuit is loftier, so that leakage is negligible, then it is said to be an IF neuron instead of an LIF neuron. The capacitor model is motivated by the fact the cell membrane is a proficient insulator and is very thin, and then has backdrop of a parallel plate capacitor. For increased biological realism, an absolute refractory period can be implemented by simply constraining the LIF neuron not to emit another fasten for 2 or three ms whenever information technology emits a fasten. The LIF model neuron, in its simplest grade, is deterministic and information technology gives the same output on repeated trials with the same input. Nether some conditions, the temporal precision of the spike times of an isolated neuron can be extremely high (Jolivet et al., 2006). However, biological neurons in vivo by and large show trial-to-trial variability. A more sophisticated model that captures this variability is the Poisson spiking neuron, explained below.
In a Poisson spiking model neuron, the neuron stochastically emits discrete spikes as its output. A spiking neuron simulation usually advances in 1-ms fourth dimension steps. On a particular time stride, the neuron either emits a spike (1) or not (0). The spiking activity of a neuron exhibits trial-to-trial variability and baseline spiking activity. For modeling purposes, spike events can be generated by a Poisson process. The firing rate of the neuron is controlled by the rate parameter of an inhomogeneous Poisson process (Ermentrout and Terman, 2010). These models are classified "as simplified conceptual models amenable to mathematical analysis" (Gurstner et al., 2012).
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Methods and Models in Neurophysics
Nicolas Brunel , in Les Houches, 2005
6.7. Stability of persistent states vs synchronized oscillations
Are persistent states stable with respect to synchronized oscillations? This question has not been addressed analytically in the network described until now. Simulations show that in such a network persistent activity states are stable. However, synapses in such simulations are oversimplified delayed delta function, with equal delays in excitatory and inhibitory synapses. Synaptic fourth dimension constants are among the parameters that are almost critical to make up one's mind the stability of asynchronous states in networks of spiking neurons (see Mato, this volume). This fact motivated the study of the dynamics of retentiveness networks with more realistic time courses. In particular, Wang studied a network in which synapses have realistic time constants (AMPA ~ 2ms, GABA ~ 5ms, NMDA ~ 50ms), where the bistability betwixt a silent land and a country in which all neurons fire repetitively is due to unstructured recurrent excitation. He observed that the dynamics is strongly influenced by the ratio of NMDA (ho-hum excitation) to AMPA (fast excitation). At depression NMDA to AMPA ratios, an oscillatory instability develops due to the fact that AMPA excitation is faster than GABA inhibition. Increasing the NMDA to AMPA ratio, persistent action is stabilized by the long time abiding of NMDA receptors [136, 137]. Similar results were obtained in simulations of networks with selective memory states [34, 39]. These studies also found that at that place is a regime at intermediate values of the NMDA/AMPA ratio in which persistent activity is stable but oscillatory. However, synapses with long time constants, even though they potentially stabilize asynchronous action, are non a necessary requirement for stability, as shown analytically by Hansel and Mato [65, 66] in an unstructured two population network of quadratic integrate-and-fire neurons (come across Mato, this volume), and numerically by Gutkin et al [64] in a network of conductance-based neurons with spatially decaying connectivity. Strong synchronization of neurons in a persistent activeness state has been proposed as a mechanism for memory erasure by Laing and Chow [80] and Gutkin et al [64].
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Neuronal Networks: A Detached Model
Winfried Simply , ... David Terman , in Mathematical Concepts and Methods in Modern Biological science, 2013
half-dozen.2.1 Neurons, Synapses, and Activeness Potentials
It is commonly believed that everything the brain does, and therefore everything we, as humans, do—from cognitive tasks such as thinking, planning, and learning to motor tasks such equally walking, breathing, and eating—is the result of the collective electric activity of neurons. At that place are roughly 1012 neurons in the human being brain. Neurons communicate with other neurons at synapses and a brain has approximately 1015 synaptic connections; that is, on average, each neuron receives input from approximately 1000 other neurons. Whether or non a neuron fires an electrical signal, or action potential, depends on many factors. These include electrical and chemic processes within the neuron itself, properties of the synaptic connections and the underlying network architecture. A fundamental upshot in neuroscience is to understand how these three factors interact to generate the circuitous activity patterns of populations of neurons that underlie all encephalon functions.
A schema of a neuron is shown in Figure six.one. Most neurons consist of dendrites, an axon, and a cell body (or soma). The dendrites spread out from the cell torso in a tree-like manner and detect incoming signals from other neurons. In response to these incoming signals, the neuron may (or may not) generate an activity potential (or nerve impulse) that propagates away from the soma forth the axon. Many axons develop side branches that assist bring information to several parts of the nervous system simultaneously.
Effigy 6.1. A schematic drawing of a neuron. More pictures of neurons can exist found at [ii].
All living cells are surrounded by a jail cell membrane that maintains a resting potential betwixt the outside and the inside of the cell. In response to a indicate, the membrane potential of a neuron may undergo a series of rapid changes, respective to the action potential. In lodge to generate an action potential, the initial stimulus must be above some threshold amount. Backdrop of the nerve impulse, including its shape and propagation velocity, are often independent of the initial (superthreshold) stimulus. Once a neuron fires an action potential, at that place is a so-chosen refractory menstruation. During this time, it is incommunicable for the neuron to generate another activeness potential.
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